BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F01SP1|AL429592
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1520 1722 0.0
>3x_Contig1520
Length = 10750
Score = 1722 bits (868), Expect = 0.0
Identities = 869/870 (99%)
Strand = Plus / Minus
Query: 1 gatcaagtcagaactcatcttcagtgactagtactctggtttgctttgaaaaccagttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3380 gatcaagtcagaactcatcttcagtgactagtactctggtttgctttgaaaaccagttgt 3321
Query: 61 ttaacacatctggacgtgggatggcatttccactcttcccacactcgaataaacacttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3320 ttaacacatctggacgtgggatggcatttccactcttcccacactcgaataaacacttgt 3261
Query: 121 ctattttaacgaactgtagttgtttgttcgcctgagccagtgtaatggcaacatgcatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3260 ctattttaacgaactgtagttgtttgttcgcctgagccagtgtaatggcaacatgcatta 3201
Query: 181 cacggtaccaatcgtccataattccgttatgagccatttgaagacccatatgcggtggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3200 cacggtaccaatcgtccataattccgttatgagccatttgaagacccatatgcggtggtc 3141
Query: 241 ctccggatcgtttaccgcgtaaggataagaatctgagcttggggaatcgatgtagtatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3140 ctccggatcgtttaccgcgtaaggataagaatctgagcttggggaatcgatgtagtatat 3081
Query: 301 gtwtcccagtgggctgcaaagagtctccattgattcgtaaactttctaaatttttgcatt 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3080 gtatcccagtgggctgcaaagagtctccattgattcgtaaactttctaaatttttgcatt 3021
Query: 361 cagtgagtcttaatacagagtcgataggtatctctttaggaacttcacagtaccgtaacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3020 cagtgagtcttaatacagagtcgataggtatctctttaggaacttcacagtaccgtaacg 2961
Query: 421 attcctgagtgacaagtgaaagtttctttagtttggatttgtgtttgcatatagatttcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2960 attcctgagtgacaagtgaaagtttctttagtttggatttgtgtttgcatatagatttcg 2901
Query: 481 tgcagctctgcatcaattgctcccaactaagaacggtgactagttttgagtcatcccaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2900 tgcagctctgcatcaattgctcccaactaagaacggtgactagttttgagtcatcccaag 2841
Query: 541 ttatctttatatcaatttgctccaaaaacacaccgtttttggcaagaaggttcaagaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2840 ttatctttatatcaatttgctccaaaaacacaccgtttttggcaagaaggttcaagaaat 2781
Query: 601 gcgggatggagtcacggttcgcctcttggtagcataaccgtaagcttttcaactgtttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2780 gcgggatggagtcacggttcgcctcttggtagcataaccgtaagcttttcaactgtttca 2721
Query: 661 aatgtggcgcaatggtgagaagtaaaccttcatgaaaatgttcgaccgctgcacttgtaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2720 aatgtggcgcaatggtgagaagtaaaccttcatgaaaatgttcgaccgctgcacttgtaa 2661
Query: 721 aatcagttagttgaaagtctatttcaggtaaccattggatttcgctgacgttgttaaggg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2660 aatcagttagttgaaagtctatttcaggtaaccattggatttcgctgacgttgttaaggg 2601
Query: 781 aaagagtgctcaaagtttccaagttgaaagcacggacgaccttcccagcatcactggcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2600 aaagagtgctcaaagtttccaagttgaaagcacggacgaccttcccagcatcactggcaa 2541
Query: 841 gtaaattgacgctatcgatatccaagacct 870
||||||||||||||||||||||||||||||
Sbjct: 2540 gtaaattgacgctatcgatatccaagacct 2511
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5378
Number of Sequences: 1807
Number of extensions: 5378
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)